殷紅歌頌的殘缺

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[生物資訊期末報告]PROMO Search Result For The Interferon Regulatory Factor Family(IRF1-IRF5)

Factors predicted by PROMO in IRF1 sequence:

NAME; MATRIX_WIDTH;
XBP-1 [T00902]; 6
YY1 [T00915]; 4
RXR-alpha [T01345]; 7
ENKTF-1 [T00255]; 8
GR-beta [T01920]; 5
TFII-I [T00824]; 6
STAT4 [T01577]; 6
c-Ets-1 [T00112]; 7
FOXP3 [T04280]; 6
NFI/CTF [T00094]; 8
GR [T05076]; 7
TFIID [T00820]; 7
GR-alpha [T00337]; 5
Elk-1 [T00250]; 9
PR B [T00696]; 7
PR A [T01661]; 7
C/EBPbeta [T00581]; 4
AP-2alphaA [T00035]; 6
SRY [T00997]; 9
TCF-4E [T02878]; 7
IRF-1 [T00423]; 9
NF-AT1 [T00550]; 9
c-Myb [T00137]; 8
VDR [T00885]; 9
PXR-1:RXR-alpha [T05671]; 8
GATA-1 [T00306]; 6
c-Ets-2 [T00113]; 9
T3R-beta1 [T00851]; 9
AP-1 [T00029]; 9
c-Jun [T00133]; 7
Pax-5 [T00070]; 7
p53 [T00671]; 7
ER-alpha [T00261]; 5
ATF3 [T01313]; 8
PEA3 [T00685]; 9
MAZ [T00490]; 13
NF-1 [T00539]; 8
C/EBPalpha [T00105]; 7
EBF [T05427]; 11
NF-Y [T00150]; 8
USF2 [T00878]; 10
RAR-alpha1 [T00719]; 13
ETF [T00270]; 11
NF-kappaB [T00590]; 12
RelA [T00594]; 11
AR [T00040]; 9
GATA-2 [T00308]; 9
Ik-1 [T02702]; 13
NF-AT2 [T01945]; 10
STAT1beta [T01573]; 10
c-Fos [T00123]; 10
ELF-1 [T01113]; 13
PU.1 [T02068]; 13
LEF-1 [T02905]; 8
PPAR-alpha:RXR-alpha [T05221]; 11
POU2F1 [T00641]; 11

Distribution of the nucleotides over the given chain:

A 26.7%
C 27.1%
G 27.5%
T 18.7%

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一月 21, 2011 發文作者 | 基礎醫學資訊相關 | 發表迴響

   

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