[生物資訊期末報告]PROMO Search Result For The Interferon Regulatory Factor Family(IRF6-IRF8)

Factors predicted by PROMO in IRF6 sequence:

NAME; MATRIX_WIDTH;
XBP-1 [T00902]; 6
Pax-5 [T00070]; 7
p53 [T00671]; 7
ENKTF-1 [T00255]; 8
TFII-I [T00824]; 6
ETF [T00270]; 11
RXR-alpha [T01345]; 7
MAZ [T00490]; 13
WT1 [T00899]; 9
E2F-1 [T01542]; 8
GR-alpha [T00337]; 5
PPAR-alpha:RXR-alpha [T05221]; 11
EBF [T05427]; 11
FOXP3 [T04280]; 6
STAT4 [T01577]; 6
c-Ets-1 [T00112]; 7
Elk-1 [T00250]; 9
RelA [T00594]; 11
IRF-1 [T00423]; 9
NF-AT1 [T00550]; 9
PR B [T00696]; 7
PR A [T01661]; 7
c-Ets-2 [T00113]; 9
MEF-2A [T01005]; 11
HNF-3alpha [T02512]; 8
GR-beta [T01920]; 5
YY1 [T00915]; 4
HOXD9 [T01424]; 10
HOXD10 [T01425]; 10
AP-2alphaA [T00035]; 6
ER-alpha [T00261]; 5
RAR-alpha1 [T00719]; 13
GCF [T00320]; 9
NFI/CTF [T00094]; 8
RBP-Jkappa [T01616]; 12
VDR [T00885]; 9
RAR-beta [T00721]; 10
PXR-1:RXR-alpha [T05671]; 8
GATA-1 [T00306]; 6
ATF3 [T01313]; 8
PEA3 [T00685]; 9
HNF-1C [T01951]; 9
HNF-1A [T00368]; 8
HNF-1B [T01950]; 9
C/EBPbeta [T00581]; 4
C/EBPalpha [T00105]; 7
c-Myb [T00137]; 8
GR [T05076]; 7
LEF-1 [T02905]; 8
NF-1 [T00539]; 8
c-Jun [T00133]; 7
COUP-TF1 [T00149]; 13
Ik-1 [T02702]; 13
CREB [T00163]; 9
ATF-2 [T00167]; 10
ATF [T00051]; 12
GATA-3 [T00311]; 12
TFIID [T00820]; 7
NF-Y [T00150]; 8
TCF-4 [T02918]; 10
AR [T00040]; 9
POU2F1 [T00641]; 11
GATA-2 [T00308]; 9
SRY [T00997]; 9
TCF-4E [T02878]; 7
T3R-beta1 [T00851]; 9
NF-AT2 [T01945]; 10
NF-AT1 [T01948]; 10
STAT1beta [T01573]; 10
IRF-2 [T01491]; 6
SRF [T00764]; 13
AP-1 [T00029]; 9
PU.1 [T02068]; 13
ELF-1 [T01113]; 13
NF-kappaB [T00590]; 12
USF2 [T00878]; 10

Distribution of the nucleotides over the given chain:

A

25.2%

C

27.6%

G

26.4%

T

20.9%

Factors predicted by PROMO in IRF7 sequence:

NAME; MATRIX_WIDTH;
XBP-1 [T00902]; 6
ENKTF-1 [T00255]; 8
C/EBPbeta [T00581]; 4
NF-1 [T00539]; 8
GR-alpha [T00337]; 5
Pax-5 [T00070]; 7
p53 [T00671]; 7
AhR:Arnt [T05394]; 10
AP-2alphaA [T00035]; 6
E2F-1 [T01542]; 8
USF2 [T00878]; 10
NF-AT2 [T01945]; 10
TFII-I [T00824]; 6
STAT4 [T01577]; 6
c-Ets-1 [T00112]; 7
STAT1beta [T01573]; 10
RAR-beta:RXR-alpha [T05420]; 12
Sp1 [T00759]; 10
ETF [T00270]; 11
IRF-1 [T00423]; 9
TFIID [T00820]; 7
FOXP3 [T04280]; 6
NF-AT1 [T00550]; 9
NFI/CTF [T00094]; 8
c-Myb [T00137]; 8
Elk-1 [T00250]; 9
GCF [T00320]; 9
RXR-alpha [T01345]; 7
PPAR-alpha:RXR-alpha [T05221]; 11
WT1 [T00899]; 9
AR [T00040]; 9
Ik-1 [T02702]; 13
EBF [T05427]; 11
YY1 [T00915]; 4
MAZ [T00490]; 13
PR B [T00696]; 7
PR A [T01661]; 7
c-Jun [T00133]; 7
NF-kappaB [T00590]; 12
NF-kappaB1 [T00593]; 11
RelA [T00594]; 11
RBP-Jkappa [T01616]; 12
T3R-beta1 [T00851]; 9
ER-alpha [T00261]; 5
HIF-1 [T01609]; 9
c-Ets-2 [T00113]; 9
c-Myc [T00140]; 6
USF1 [T00874]; 10
GR-beta [T01920]; 5
RAR-beta [T00721]; 10
ATF3 [T01313]; 8
E2F [T00221]; 10
GATA-1 [T00306]; 6
AhR [T01795]; 11
Egr-3 [T00243]; 13
ATF-1 [T00968]; 11
AP-1 [T00029]; 9
ELF-1 [T01113]; 13
NF-AT1 [T01948]; 10

A

17.7%

C

34.7%

G

33.1%

T

14.5%

Factors predicted by PROMO in IRF8 sequence:

NAME; MATRIX_WIDTH;
ER-alpha [T00261]; 5
GR-beta [T01920]; 5
ENKTF-1 [T00255]; 8
C/EBPbeta [T00581]; 4
C/EBPalpha [T00105]; 7
TFII-I [T00824]; 6
GATA-1 [T00306]; 6
GR-alpha [T00337]; 5
NF-1 [T00539]; 8
XBP-1 [T00902]; 6
STAT4 [T01577]; 6
c-Ets-1 [T00112]; 7
IRF-1 [T00423]; 9
TFIID [T00820]; 7
FOXP3 [T04280]; 6
NF-AT1 [T00550]; 9
PR B [T00696]; 7
PR A [T01661]; 7
AhR:Arnt [T05394]; 10
c-Ets-2 [T00113]; 9
YY1 [T00915]; 4
AP-2alphaA [T00035]; 6
SRY [T00997]; 9
TCF-4E [T02878]; 7
GR [T05076]; 7
VDR [T00885]; 9
PXR-1:RXR-alpha [T05671]; 8
LEF-1 [T02905]; 8
TCF-4 [T02918]; 10
HOXD9 [T01424]; 10
HOXD10 [T01425]; 10
Pax-5 [T00070]; 7
p53 [T00671]; 7
IRF-2 [T01491]; 6
ATF3 [T01313]; 8
NFI/CTF [T00094]; 8
c-Myb [T00137]; 8
NF-AT2 [T01945]; 10
STAT1beta [T01573]; 10
HNF-3alpha [T02512]; 8
NF-kappaB [T00590]; 12
NF-kappaB1 [T00593]; 11
RelA [T00594]; 11
Elk-1 [T00250]; 9
E2F-1 [T01542]; 8
AP-1 [T00029]; 9
c-Jun [T00133]; 7
c-Fos [T00123]; 10
USF2 [T00878]; 10
ETF [T00270]; 11
AR [T00040]; 9
PEA3 [T00685]; 9
EBF [T05427]; 11
HNF-1C [T01951]; 9
HNF-1B [T01950]; 9
NF-AT1 [T01948]; 10
T3R-beta1 [T00851]; 9
MEF-2A [T01005]; 11
E2F [T00221]; 10
Ik-1 [T02702]; 13
GATA-2 [T00308]; 9
RXR-alpha [T01345]; 7
AhR [T01795]; 11
GCF [T00320]; 9
SRF [T00764]; 13
POU2F1 [T00641]; 11
PU.1 [T02068]; 13
HNF-4alpha [T03828]; 13
ELF-1 [T01113]; 13

Distribution of the nucleotides over the given chain:

A

22.2%

C

26.3%

G

31.9%

T

19.5%